Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMEA3753290_02534 | Not Available | Positive | 2655141 - 2655959 | 29388.3 |
| transcriptional regulator | SAMEA3753290_02535 | Not Available | Positive | 2655956 - 2656213 | 10007.5 |
| putative transferase | SAMEA3753290_02536 | Not Available | Negative | 2656189 - 2656743 | 20246.3 |
| tail protein from bacteriophage (fragment) | SAMEA3753290_02537 | Not Available | Positive | 2657191 - 2657835 | 24878.5 |
| transposase orf2 of is683 | SAMEA3753290_02538 | Not Available | Positive | 2658799 - 2659092 | 11141.8 |
| transposase-like protein | SAMEA3753290_02539 | Not Available | Positive | 2659112 - 2660644 | 57251.9 |
| transposase | SAMEA3753290_02540 | Not Available | Positive | 2660867 - 2661145 | 10179.1 |
| uncharacterised protein | SAMEA3753290_02541 | Not Available | Negative | 2661165 - 2661680 | 18791.3 |
| uncharacterised protein | SAMEA3753290_02542 | Not Available | Positive | 2662100 - 2662876 | 29514.3 |
| type i restriction-modification system, m subunit | SAMEA3753290_02543 | Not Available | Negative | 2663532 - 2665139 | 61126.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





