Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein | SAMEA3753290_02413 | Not Available | Negative | 2555338 - 2556216 | 32536.3 |
| heat shock protein | SAMEA3753290_02414 | Not Available | Negative | 2556241 - 2556642 | 15514.8 |
| putative hydrolase | SAMEA3753290_02415 | Not Available | Negative | 2556653 - 2557321 | 25400.2 |
| membrane protein igaa | SAMEA3753290_02416 | Not Available | Negative | 2557386 - 2559521 | 79489.4 |
| adp compounds hydrolase | SAMEA3753290_02417 | Not Available | Positive | 2559841 - 2560401 | 21154.4 |
| penicillin-binding protein 1a | SAMEA3753290_02418 | Not Available | Negative | 2560566 - 2563118 | 93598.4 |
| pilus assembly protein | SAMEA3753290_02419 | Not Available | Positive | 2563238 - 2564017 | 29028.9 |
| putative fimbrial assembly protein | SAMEA3753290_02420 | Not Available | Positive | 2564017 - 2564556 | 20850.2 |
| protein involved in utilization of dna as a carbon source | SAMEA3753290_02421 | Not Available | Positive | 2564540 - 2564980 | 16902.1 |
| protein involved in utilization of dna as a carbon source | SAMEA3753290_02422 | Not Available | Positive | 2564970 - 2565374 | 15099.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





