Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3753290_02403 | Not Available | Negative | 2541892 - 2542770 | 33301.4 |
| dna-binding transcriptional regulator | SAMEA3753290_02404 | Not Available | Negative | 2542973 - 2543209 | 8660.66 |
| ferrous iron transport protein b | SAMEA3753290_02405 | Not Available | Negative | 2543209 - 2545530 | 84462.7 |
| ferrous iron transport protein a | SAMEA3753290_02406 | Not Available | Negative | 2545547 - 2545774 | 8352.26 |
| putative transcription accessory protein | SAMEA3753290_02407 | Not Available | Negative | 2546212 - 2548533 | 85076.6 |
| transcription elongation factor greb | SAMEA3753290_02408 | Not Available | Negative | 2548630 - 2549106 | 18546.1 |
| transcriptional regulatory protein ompr | SAMEA3753290_02409 | Not Available | Positive | 2549334 - 2550053 | 27355.3 |
| osmolarity sensor protein envz | SAMEA3753290_02410 | Not Available | Positive | 2550050 - 2551402 | 50337.1 |
| phosphoenolpyruvate carboxykinase | SAMEA3753290_02411 | Not Available | Negative | 2551478 - 2553100 | 59660.7 |
| inner membrane protein | SAMEA3753290_02412 | Not Available | Positive | 2553479 - 2555203 | 64473.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





