Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase | SAMEA3753290_02383 | Not Available | Positive | 2514794 - 2516227 | 52825.4 |
| glycogen phosphorylase | SAMEA3753290_02384 | Not Available | Positive | 2516246 - 2518693 | 93177.7 |
| membrane protein | SAMEA3753290_02385 | Not Available | Positive | 2518821 - 2520326 | 56473.7 |
| uncharacterised protein | SAMEA3753290_02386 | Not Available | Positive | 2520341 - 2521051 | 26628.4 |
| uncharacterised protein | SAMEA3753290_02387 | Not Available | Positive | 2521054 - 2521821 | 29707.1 |
| membrane protein | SAMEA3753290_02388 | Not Available | Positive | 2521824 - 2522429 | 23643.6 |
| aerobic glycerol-3-phosphate dehydrogenase | SAMEA3753290_02389 | Not Available | Negative | 2522483 - 2523988 | 56753.8 |
| thiosulfate sulfurtransferase | SAMEA3753290_02390 | Not Available | Positive | 2524178 - 2524504 | 12067.2 |
| rhomboid intramembrane serine protease | SAMEA3753290_02391 | Not Available | Positive | 2524549 - 2525379 | 31276.4 |
| dna-binding transcriptional repressor glpr | SAMEA3753290_02392 | Not Available | Positive | 2525396 - 2526154 | 28049.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





