Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753290_04398 | Not Available | Positive | 4470833 - 4471531 | 24627.2 |
| Putative repressor protein | SAMEA3753290_04399 | Not Available | Negative | 4472602 - 4472787 | 7052.62 |
| putative prophage protein | SAMEA3753290_04400 | Not Available | Positive | 4473040 - 4473231 | 7421.09 |
| Transcriptional regulator | SAMEA3753290_04401 | Not Available | Positive | 4473463 - 4473750 | 11163.2 |
| uncharacterised protein | SAMEA3753290_04402 | Not Available | Positive | 4473750 - 4473860 | 4093.21 |
| Antirepressor | SAMEA3753290_04403 | Not Available | Positive | 4474565 - 4475167 | 22842.1 |
| inner membrane protein | SAMEA3753290_04404 | Not Available | Positive | 4475458 - 4476075 | 22049.8 |
| Dna ligase (nad(+)) | SAMEA3753290_04405 | Not Available | Negative | 4476072 - 4477754 | 63214.8 |
| Hypothetical protein | SAMEA3753290_04406 | Not Available | Positive | 4478012 - 4478635 | 23594.1 |
| rna polymerase omega subunit | SAMEA3753290_04407 | Not Available | Positive | 4478690 - 4478965 | 10237.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





