Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slp family outer membrane lipoprotein | SAMEA3753290_02312 | Not Available | Negative | 2438209 - 2438949 | 27807.5 |
| yhis | SAMEA3753290_02313 | Not Available | Negative | 2439400 - 2440245 | 32404.3 |
| arsenate reductase | SAMEA3753290_02314 | Not Available | Negative | 2440870 - 2441295 | 15882.3 |
| arsenical pump membrane protein | SAMEA3753290_02315 | Not Available | Negative | 2441308 - 2442597 | 45528.2 |
| dna-binding transcriptional repressor arsr | SAMEA3753290_02316 | Not Available | Negative | 2442651 - 2443004 | 13253.3 |
| uncharacterised protein | SAMEA3753290_02317 | Not Available | Negative | 2443543 - 2443716 | 6147.09 |
| glutathione reductase | SAMEA3753290_02318 | Not Available | Negative | 2443881 - 2445233 | 48745.3 |
| dna (exogenous) processing protein | SAMEA3753290_02319 | Not Available | Negative | 2445305 - 2446147 | 31946.5 |
| oligopeptidase a | SAMEA3753290_02320 | Not Available | Positive | 2446350 - 2448392 | 77156.3 |
| methyltransferase | SAMEA3753290_02321 | Not Available | Positive | 2448400 - 2449152 | 26920.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





