Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-xylulose 5-phosphate 3-epimerase | SAMEA3753290_02224 | Not Available | Negative | 2342632 - 2343492 | 32426.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3753290_02225 | Not Available | Negative | 2343485 - 2344147 | 23461.1 |
| l-xylulose/3-keto-l-gulonate kinase | SAMEA3753290_02226 | Not Available | Negative | 2344144 - 2345634 | 55105.0 |
| 2,3-diketo-l-gulonate trap transporter, substrate-binding periplasmic protein | SAMEA3753290_02227 | Not Available | Negative | 2345638 - 2346624 | 36003.1 |
| 2,3-diketo-l-gulonate trap transporter, large permease protein | SAMEA3753290_02228 | Not Available | Negative | 2346637 - 2347914 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter, small permease protein | SAMEA3753290_02229 | Not Available | Negative | 2347917 - 2348390 | 17516.9 |
| beta-galactosidase | SAMEA3753290_02230 | Not Available | Negative | 2348508 - 2348975 | 17533.0 |
| 2,3-diketo-l-gulonate reductase | SAMEA3753290_02231 | Not Available | Negative | 2348987 - 2349985 | 36588.9 |
| dna-binding transcriptional repressor | SAMEA3753290_02232 | Not Available | Positive | 2350186 - 2351034 | 31109.5 |
| electron transport protein ysaa | SAMEA3753290_02233 | Not Available | Positive | 2351136 - 2351609 | 17434.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





