Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(ser) selenium transferase | SAMEA3753290_02214 | Not Available | Positive | 2331475 - 2332866 | 50610.2 |
| selenocysteinyl-trna-specific translation factor | SAMEA3753290_02215 | Not Available | Positive | 2332863 - 2334707 | 68852.5 |
| putative alcohol dehydrogenase | SAMEA3753290_02216 | Not Available | Positive | 2334897 - 2336048 | 40400.7 |
| lactaldehyde dehydrogenase | SAMEA3753290_02217 | Not Available | Positive | 2336213 - 2337751 | 56339.5 |
| membrane protein | SAMEA3753290_02218 | Not Available | Negative | 2337970 - 2338182 | 8007.14 |
| inner membrane protein | SAMEA3753290_02219 | Not Available | Positive | 2338296 - 2338619 | 12409.3 |
| hlyd-family secretion protein | SAMEA3753290_02220 | Not Available | Positive | 2338625 - 2339761 | 41773.5 |
| lysr family transcriptional regulator | SAMEA3753290_02221 | Not Available | Negative | 2339758 - 2340732 | 37285.5 |
| putative scaffolding protein | SAMEA3753290_02222 | Not Available | Positive | 2340856 - 2341596 | 27369.9 |
| l-ribulose-5-phosphate 4-epimerase | SAMEA3753290_02223 | Not Available | Negative | 2341943 - 2342638 | 25617.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





