Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system transporter subunit iib | SAMEA3753290_02204 | Not Available | Positive | 2319528 - 2319815 | 10034.4 |
| pts system eiic component | SAMEA3753290_02205 | Not Available | Positive | 2319828 - 2321084 | 44342.8 |
| putative transposase (partial) | SAMEA3753290_02206 | Not Available | Negative | 2321331 - 2321585 | 9546.79 |
| deoxyribose specific mutarotase | SAMEA3753290_02207 | Not Available | Negative | 2322006 - 2323019 | 38147.6 |
| major facilitator superfamily protein | SAMEA3753290_02208 | Not Available | Negative | 2323031 - 2324347 | 48503.2 |
| deoxyribokinase | SAMEA3753290_02209 | Not Available | Negative | 2324375 - 2325295 | 33223.8 |
| transcriptional regulator | SAMEA3753290_02210 | Not Available | Positive | 2325601 - 2326383 | 29041.2 |
| uncharacterised protein | SAMEA3753290_02211 | Not Available | Positive | 2327637 - 2328014 | 12941.0 |
| uncharacterised protein | SAMEA3753290_02212 | Not Available | Positive | 2328078 - 2328800 | 25682.8 |
| putative glutathione s-transferase | SAMEA3753290_02213 | Not Available | Positive | 2330769 - 2331377 | 22546.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





