Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, duf1107 family | SAMEA3753290_02152 | Not Available | Positive | 2254808 - 2255014 | 8072.24 |
| putative transporter | SAMEA3753290_02153 | Not Available | Negative | 2255076 - 2256419 | 49783.6 |
| methionine sulfoxide reductase a | SAMEA3753290_02155 | Not Available | Negative | 2256742 - 2257380 | 23316.3 |
| putative outer membrane protein assembly factor | SAMEA3753290_02156 | Not Available | Positive | 2257586 - 2259319 | 64799.7 |
| translocation and assembly module for autotransporter export, inner membrane subunit | SAMEA3753290_02157 | Not Available | Positive | 2259316 - 2263095 | 136908.0 |
| aig2 family protein | SAMEA3753290_02158 | Not Available | Positive | 2263098 - 2263439 | 12867.2 |
| inorganic pyrophosphatase | SAMEA3753290_02159 | Not Available | Negative | 2263819 - 2264349 | 19704.6 |
| abc transporter substrate-binding protein | SAMEA3753290_02160 | Not Available | Positive | 2264659 - 2265615 | 34362.6 |
| sugar transport system atp-binding protein | SAMEA3753290_02161 | Not Available | Positive | 2265755 - 2267257 | 55191.4 |
| abc transporter permease | SAMEA3753290_02162 | Not Available | Positive | 2267271 - 2268293 | 35460.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





