Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | SAMEA3753290_02112 | Not Available | Positive | 2225363 - 2225482 | 4353.18 |
| cytoplasmic protein | SAMEA3753290_02113 | Not Available | Positive | 2225510 - 2225764 | 9442.28 |
| phage shock protein a | SAMEA3753290_02114 | Not Available | Positive | 2225783 - 2226019 | 8805.74 |
| phage shock protein a | SAMEA3753290_02115 | Not Available | Positive | 2226047 - 2226481 | 15525.1 |
| conserved protein, duf2491 family | SAMEA3753290_02116 | Not Available | Positive | 2226531 - 2227190 | 25013.4 |
| membrane protein yjfl | SAMEA3753290_02117 | Not Available | Positive | 2227208 - 2227606 | 14224.7 |
| putative membrane protein yjfm | SAMEA3753290_02118 | Not Available | Positive | 2227616 - 2227996 | 13973.1 |
| glutathionylspermidine synthase yjfc | SAMEA3753290_02119 | Not Available | Positive | 2228257 - 2229420 | 45118.2 |
| isovaleryl coa dehydrogenase | SAMEA3753290_02120 | Not Available | Positive | 2229504 - 2231129 | 60698.6 |
| protein | SAMEA3753290_02121 | Not Available | Negative | 2231246 - 2231521 | 9949.64 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





