Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3753290_02071 | Not Available | Negative | 2184033 - 2184902 | 33055.1 |
| radical sam superfamily protein | SAMEA3753290_02072 | Not Available | Negative | 2185291 - 2186319 | 38708.8 |
| elongation factor p (ef-p) | SAMEA3753290_02073 | Not Available | Positive | 2186361 - 2186927 | 20592.4 |
| entericidin a | SAMEA3753290_02074 | Not Available | Positive | 2186979 - 2187104 | 4359.48 |
| entericidin b | SAMEA3753290_02075 | Not Available | Positive | 2187215 - 2187361 | 4809.81 |
| quaternary ammonium compound-resistance protein | SAMEA3753290_02077 | Not Available | Positive | 2187536 - 2187853 | 10901.0 |
| outer membrane lipoprotein | SAMEA3753290_02078 | Not Available | Negative | 2187850 - 2188383 | 19924.7 |
| beta-lactamase | SAMEA3753290_02079 | Not Available | Negative | 2188472 - 2189605 | 41493.8 |
| fumarate reductase subunit d | SAMEA3753290_02080 | Not Available | Negative | 2189668 - 2190027 | 13121.8 |
| fumarate reductase subunit c | SAMEA3753290_02081 | Not Available | Negative | 2190038 - 2190433 | 15015.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





