Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753290_02051 | Not Available | Positive | 2163716 - 2163883 | 6206.95 |
| trna modification gtpase trme | SAMEA3753290_02052 | Not Available | Positive | 2164061 - 2164906 | 31625.8 |
| uncharacterised protein | SAMEA3753290_02053 | Not Available | Positive | 2164918 - 2165541 | 23831.2 |
| predicted gtpase | SAMEA3753290_02054 | Not Available | Positive | 2165543 - 2167381 | 68693.3 |
| bex protein | SAMEA3753290_02055 | Not Available | Positive | 2167395 - 2169047 | 62925.4 |
| inner membrane protein | SAMEA3753290_02056 | Not Available | Negative | 2169769 - 2170392 | 23250.8 |
| uncharacterised protein | SAMEA3753290_02057 | Not Available | Negative | 2170653 - 2170793 | 5350.42 |
| uncharacterised protein | SAMEA3753290_02058 | Not Available | Negative | 2171135 - 2171425 | 9376.23 |
| site-specific recombinase, phage integrase | SAMEA3753290_02059 | Not Available | Negative | 2171871 - 2173052 | 45268.7 |
| Trna-phe | Not Available | Not Available | Positive | 2173229 - 2173304 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





