Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-restriction protein | SAMEA3753290_02041 | Not Available | Negative | 2156732 - 2157217 | 18144.3 |
| cp4-57 prophage protein | SAMEA3753290_02042 | Not Available | Negative | 2157309 - 2158130 | 31363.6 |
| uncharacterised protein | SAMEA3753290_02043 | Not Available | Negative | 2158711 - 2158929 | 8332.42 |
| uncharacterised protein | SAMEA3753290_02044 | Not Available | Negative | 2158942 - 2159928 | 39017.1 |
| malate transporter | SAMEA3753290_02045 | Not Available | Positive | 2160581 - 2161204 | 24743.1 |
| putative phage-related regulatory protein | SAMEA3753290_02046 | Not Available | Positive | 2161311 - 2161526 | 8461.22 |
| uncharacterised protein | SAMEA3753290_02047 | Not Available | Negative | 2161672 - 2161935 | 9099.81 |
| uncharacterised protein | SAMEA3753290_02048 | Not Available | Negative | 2162035 - 2162163 | 4919.0 |
| uncharacterised protein | SAMEA3753290_02049 | Not Available | Positive | 2162276 - 2162668 | 14513.3 |
| transposase orf1 of is3 family is element | SAMEA3753290_02050 | Not Available | Positive | 2162792 - 2162995 | 7672.13 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





