Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor kinase | SAMEA3753290_02021 | Not Available | Negative | 2139185 - 2140816 | 60553.4 |
| uncharacterized conserved protein | SAMEA3753290_02022 | Not Available | Positive | 2140997 - 2141227 | 8650.47 |
| acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3753290_02023 | Not Available | Positive | 2141239 - 2141511 | 10469.6 |
| protein | SAMEA3753290_02024 | Not Available | Positive | 2141738 - 2142034 | 11467.6 |
| putative inner membrane protein | SAMEA3753290_02025 | Not Available | Positive | 2142062 - 2142235 | 6555.44 |
| lysyl-trna synthetase | SAMEA3753290_02026 | Not Available | Negative | 2142354 - 2143871 | 57829.9 |
| putative oligopeptide transporter | SAMEA3753290_02027 | Not Available | Negative | 2144108 - 2145565 | 53043.7 |
| lysine decarboxylase 1 | SAMEA3753290_02028 | Not Available | Negative | 2145624 - 2147771 | 81264.7 |
| cadaverine/lysine antiporter | SAMEA3753290_02029 | Not Available | Negative | 2147851 - 2149185 | 46667.8 |
| transcriptional activator | SAMEA3753290_02030 | Not Available | Negative | 2149551 - 2151089 | 57856.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





