Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonates transport system, permease protein | SAMEA3753290_02000 | Not Available | Negative | 2112100 - 2112879 | 28385.3 |
| phosphonate abc transporter, substrate-binding protein | SAMEA3753290_02001 | Not Available | Negative | 2112985 - 2114001 | 37372.6 |
| phosphonate abc transporter atpase | SAMEA3753290_02002 | Not Available | Negative | 2114026 - 2114814 | 29395.3 |
| phnb protein | SAMEA3753290_02003 | Not Available | Negative | 2114947 - 2115390 | 16138.1 |
| alkylphosphonate uptake protein in phosphonate metabolism | SAMEA3753290_02004 | Not Available | Negative | 2115550 - 2115885 | 12345.7 |
| putative vimentin | SAMEA3753290_02005 | Not Available | Positive | 2116288 - 2118516 | 84225.6 |
| mutational suppressor of yhjh motility mutation, function uncharacterised | SAMEA3753290_02006 | Not Available | Positive | 2118513 - 2119391 | 32883.6 |
| proline/glycine betaine transporter | SAMEA3753290_02007 | Not Available | Positive | 2119655 - 2121157 | 54836.1 |
| dna-binding transcriptional regulator basr | SAMEA3753290_02009 | Not Available | Negative | 2122435 - 2123103 | 25002.3 |
| cell division protein | SAMEA3753290_02010 | Not Available | Negative | 2123100 - 2124743 | 61568.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





