Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-beta-lactamase superfamily protein | SAMEA3753290_01980 | Not Available | Negative | 2094363 - 2096348 | 73235.9 |
| d-allose kinase | SAMEA3753290_01981 | Not Available | Negative | 2096621 - 2097124 | 18014.7 |
| allulose-6-phosphate 3-epimerase | SAMEA3753290_01982 | Not Available | Negative | 2097374 - 2098069 | 26087.6 |
| d-allose transporter subunit | SAMEA3753290_01983 | Not Available | Negative | 2098080 - 2099060 | 34317.8 |
| d-allose transporter atp-binding protein | SAMEA3753290_01984 | Not Available | Negative | 2099039 - 2100571 | 56780.4 |
| d-allose transporter subunit | SAMEA3753290_01985 | Not Available | Negative | 2100698 - 2101633 | 32924.8 |
| rpir family transcriptional regulator | SAMEA3753290_01986 | Not Available | Negative | 2101692 - 2102582 | 32364.1 |
| ribose-5-phosphate isomerase b | SAMEA3753290_01987 | Not Available | Positive | 2102941 - 2103390 | 16074.3 |
| membrane protein | SAMEA3753290_01988 | Not Available | Positive | 2103459 - 2103788 | 13454.4 |
| carbon-phosphorus lyase complex accessory protein (metallo-beta-lactamase superfamily protein) | SAMEA3753290_01989 | Not Available | Negative | 2103935 - 2104693 | 27844.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





