Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase subunit nrfe | SAMEA3753290_01969 | Not Available | Positive | 2081863 - 2083485 | 60274.9 |
| formate-dependent nitrite reductase complex subunit | SAMEA3753290_01970 | Not Available | Positive | 2083478 - 2083861 | 14543.0 |
| formate-dependent nitrite reductase complex subunit nrfg | SAMEA3753290_01971 | Not Available | Positive | 2083858 - 2084454 | 22759.5 |
| glutamate/aspartate:proton symporter | SAMEA3753290_01972 | Not Available | Positive | 2084796 - 2086109 | 47107.0 |
| sel1 domain-containing protein | SAMEA3753290_01973 | Not Available | Negative | 2086187 - 2086876 | 25080.4 |
| formate dehydrogenase-h subunit alpha | SAMEA3753290_01974 | Not Available | Negative | 2086970 - 2088649 | 62465.9 |
| multidrug resistance outer membrane protein | SAMEA3753290_01976 | Not Available | Negative | 2089315 - 2090781 | 53437.3 |
| multidrug resistance protein | SAMEA3753290_01977 | Not Available | Negative | 2090778 - 2092829 | 76228.3 |
| multidrug resistance protein | SAMEA3753290_01978 | Not Available | Negative | 2092829 - 2093860 | 36924.3 |
| formate dehydrogenase h | SAMEA3753290_01979 | Not Available | Negative | 2093879 - 2094154 | 10287.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





