Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal vertex protein | SAMEA3753290_04156 | Not Available | Positive | 4239316 - 4240350 | 38179.1 |
| Transcriptional regulator | SAMEA3753290_04157 | Not Available | Positive | 4240416 - 4240673 | 9837.05 |
| Hypothetical protein | SAMEA3753290_04158 | Not Available | Negative | 4240742 - 4241098 | 13098.8 |
| Valyl-trna synthetase | SAMEA3753290_04159 | Not Available | Negative | 4241113 - 4241400 | 10905.0 |
| Plasmid partitioning/stability family protein | SAMEA3753290_04160 | Not Available | Negative | 4241415 - 4241729 | 11623.1 |
| Recombinase | SAMEA3753290_04161 | Not Available | Negative | 4241734 - 4242693 | 34953.7 |
| Replication protein | SAMEA3753290_04162 | Not Available | Negative | 4242770 - 4245595 | 107722.0 |
| uncharacterised protein | SAMEA3753290_04163 | Not Available | Negative | 4245592 - 4245981 | 14653.1 |
| Derepression protein | SAMEA3753290_04164 | Not Available | Negative | 4246054 - 4246284 | 9138.01 |
| Hypothetical protein | SAMEA3753290_04167 | Not Available | Negative | 4246607 - 4246906 | 11158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





