Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol-6-phosphate 2-dehydrogenase | SAMEA3753290_01906 | Not Available | Negative | 2015427 - 2016233 | 29009.7 |
| transcriptional regulator of sorbose uptake and utilization genes | SAMEA3753290_01907 | Not Available | Negative | 2016303 - 2017250 | 35046.0 |
| ribosomal large subunit pseudouridine synthase f | SAMEA3753290_01908 | Not Available | Positive | 2017598 - 2018470 | 32448.5 |
| yjbd family (duf3811) | SAMEA3753290_01909 | Not Available | Negative | 2018471 - 2018743 | 10576.7 |
| uncharacterised protein | SAMEA3753290_01910 | Not Available | Positive | 2018745 - 2018909 | 6481.14 |
| spfh domain-containing protein | SAMEA3753290_01911 | Not Available | Positive | 2019273 - 2020400 | 42349.5 |
| nucleotidyltransferase | SAMEA3753290_01912 | Not Available | Positive | 2020406 - 2021197 | 30478.6 |
| zeta toxin | SAMEA3753290_01913 | Not Available | Negative | 2021233 - 2022159 | 34484.5 |
| lysine-sensitive aspartokinase iii | SAMEA3753290_01914 | Not Available | Negative | 2022304 - 2023653 | 48566.6 |
| glucosephosphate isomerase | SAMEA3753290_01916 | Not Available | Positive | 2024178 - 2025827 | 61591.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





