Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteinyl-trna synthetase | SAMEA3753290_01854 | Not Available | Positive | 1952344 - 1953729 | 52186.9 |
| putative membrane-bound metal-dependent hydrolase | SAMEA3753290_01855 | Not Available | Negative | 1953765 - 1954286 | 19457.4 |
| putative rna-binding protein | SAMEA3753290_01856 | Not Available | Negative | 1954394 - 1954606 | 7389.95 |
| 5,10-methylene-tetrahydrofolate dehydrogenase | SAMEA3753290_01857 | Not Available | Negative | 1954608 - 1955474 | 31105.6 |
| fimbrial-like protein | SAMEA3753290_01858 | Not Available | Positive | 1955945 - 1956487 | 18475.5 |
| fimbrial chaperone | SAMEA3753290_01859 | Not Available | Positive | 1956707 - 1957399 | 25432.1 |
| fimbrial outer membrane usher protein | SAMEA3753290_01860 | Not Available | Positive | 1957430 - 1959892 | 91324.2 |
| fimbrial protein | SAMEA3753290_01861 | Not Available | Positive | 1960051 - 1961058 | 36524.9 |
| fimbrial protein | SAMEA3753290_01862 | Not Available | Positive | 1961069 - 1961584 | 18167.5 |
| two component transcriptional regulator, luxr family | SAMEA3753290_01863 | Not Available | Negative | 1961587 - 1962219 | 23678.0 |
Pathways
622 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





