Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate hydrolase | SAMEA3753290_01833 | Not Available | Positive | 1930240 - 1930722 | 18223.6 |
| negative regulator of allantoin and glyoxylate utilization operons | SAMEA3753290_01834 | Not Available | Positive | 1930800 - 1931615 | 29271.4 |
| glyoxylate carboligase (tartronate-semialdehyde synthase) | SAMEA3753290_01835 | Not Available | Positive | 1931705 - 1933486 | 64735.5 |
| hydroxypyruvate isomerase | SAMEA3753290_01836 | Not Available | Positive | 1933499 - 1934275 | 29370.1 |
| 2-hydroxy-3-oxopropionate reductase | SAMEA3753290_01837 | Not Available | Positive | 1934375 - 1935253 | 30802.5 |
| putative allantoin permease | SAMEA3753290_01838 | Not Available | Positive | 1935422 - 1936876 | 52449.2 |
| allantoinase | SAMEA3753290_01839 | Not Available | Positive | 1936936 - 1938297 | 49588.4 |
| putative permease | SAMEA3753290_01840 | Not Available | Positive | 1938354 - 1939655 | 47228.2 |
| glycerate kinase ii | SAMEA3753290_01841 | Not Available | Positive | 1939677 - 1940822 | 38704.9 |
| putative glyoxylate utilization | SAMEA3753290_01843 | Not Available | Negative | 1941050 - 1941835 | 28692.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





