Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase | SAMEA3753290_01779 | Not Available | Positive | 1871892 - 1872710 | 30272.6 |
| asnc family transcriptional regulator | SAMEA3753290_01780 | Not Available | Positive | 1872863 - 1873321 | 17438.4 |
| abc transporter atp-binding protein/permease | SAMEA3753290_01781 | Not Available | Positive | 1873351 - 1875123 | 66062.4 |
| multidrug abc transporter atp-binding protein | SAMEA3753290_01782 | Not Available | Positive | 1875116 - 1876897 | 65258.6 |
| glutamine synthetase | SAMEA3753290_01783 | Not Available | Positive | 1877078 - 1877416 | 12259.9 |
| ammonia channel precursor (ammonia transporter) | SAMEA3753290_01784 | Not Available | Positive | 1877446 - 1878732 | 44535.5 |
| acyl-coa thioesterase | SAMEA3753290_01785 | Not Available | Negative | 1878781 - 1879641 | 31968.1 |
| putative lipoprotein | SAMEA3753290_01786 | Not Available | Positive | 1879859 - 1880431 | 19442.3 |
| methylated dna-protein cysteine alkyltransferase | SAMEA3753290_01787 | Not Available | Negative | 1880462 - 1880773 | 11488.8 |
| rna signal recognition particle 4.5s rna | SAMEA3753290_01790 | Not Available | Positive | 1881152 - 1881505 | 13318.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





