Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber protein | SAMEA3753290_04136 | Not Available | Negative | 4221999 - 4223294 | 47096.4 |
| Putative tail fiber assembly protein | SAMEA3753290_04137 | Not Available | Negative | 4223301 - 4223855 | 21595.6 |
| Tail protein | SAMEA3753290_04138 | Not Available | Negative | 4223858 - 4225744 | 68092.7 |
| Tail protein | SAMEA3753290_04139 | Not Available | Negative | 4225741 - 4226376 | 24643.4 |
| Baseplate j/gp47 family protein | SAMEA3753290_04140 | Not Available | Negative | 4226373 - 4227557 | 43451.4 |
| Hypothetical protein | SAMEA3753290_04141 | Not Available | Negative | 4227550 - 4227900 | 12872.4 |
| Tail tape measure protein | SAMEA3753290_04142 | Not Available | Negative | 4227890 - 4229986 | 74114.2 |
| Hypothetical protein | SAMEA3753290_04143 | Not Available | Negative | 4230174 - 4230461 | 10805.0 |
| M15 family peptidase | SAMEA3753290_04144 | Not Available | Negative | 4230532 - 4230873 | 12885.1 |
| uncharacterised protein | SAMEA3753290_04145 | Not Available | Negative | 4230870 - 4230977 | 4360.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





