Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3753290_01718 | Not Available | Positive | 1808287 - 1809402 | 41539.9 |
| pyrroline-5-carboxylate reductase | SAMEA3753290_01719 | Not Available | Negative | 1809419 - 1810228 | 28146.6 |
| putative cytoplasmic protein | SAMEA3753290_01720 | Not Available | Positive | 1810348 - 1810812 | 17229.8 |
| shikimate kinase | SAMEA3753290_01721 | Not Available | Positive | 1810989 - 1811513 | 19151.9 |
| protein | SAMEA3753290_01722 | Not Available | Positive | 1811563 - 1811754 | 7281.55 |
| putative chorismate biosynthesis protein | SAMEA3753290_01723 | Not Available | Positive | 1812012 - 1812353 | 12553.2 |
| putative chorismate biosynthesis protein | SAMEA3753290_01724 | Not Available | Positive | 1812366 - 1812689 | 11846.7 |
| conserved protein, upf0345 family | SAMEA3753290_01725 | Not Available | Positive | 1812761 - 1813045 | 10234.9 |
| exonuclease rdgc | SAMEA3753290_01726 | Not Available | Negative | 1813693 - 1814670 | 36569.6 |
| fructokinase | SAMEA3753290_01727 | Not Available | Positive | 1814729 - 1815637 | 32529.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





