Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein evpb | SAMEA3753290_01597 | Not Available | Negative | 1670004 - 1671479 | 55705.0 |
| uncharacterised protein | SAMEA3753290_01598 | Not Available | Negative | 1671530 - 1671754 | 8411.01 |
| type vi secretion protein | SAMEA3753290_01599 | Not Available | Negative | 1671789 - 1672289 | 18037.4 |
| putative type vi secretion system protein | SAMEA3753290_01600 | Not Available | Positive | 1672986 - 1673504 | 19256.8 |
| impa family type vi secretion-associated protein | SAMEA3753290_01601 | Not Available | Positive | 1673714 - 1675855 | 79784.1 |
| putative protein rhsd | SAMEA3753290_01602 | Not Available | Positive | 1675931 - 1680184 | 158778.0 |
| dsorf-h1 | SAMEA3753290_01603 | Not Available | Positive | 1680196 - 1680633 | 16558.6 |
| h repeat-associated protein | SAMEA3753290_01604 | Not Available | Positive | 1680998 - 1681771 | 29399.1 |
| putative carbon-nitrogen hydrolase | SAMEA3753290_01605 | Not Available | Negative | 1682084 - 1682854 | 28923.5 |
| inhibitor of vertebrate lysozyme precursor | SAMEA3753290_01606 | Not Available | Positive | 1683035 - 1683481 | 15996.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





