Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3753290_01577 | Not Available | Positive | 1647527 - 1648249 | 27212.7 |
| ribonuclease h | SAMEA3753290_01578 | Not Available | Negative | 1648246 - 1648713 | 17597.9 |
| dna polymerase iii subunit epsilon | SAMEA3753290_01579 | Not Available | Positive | 1648769 - 1649509 | 27389.9 |
| Trna-asp | Not Available | Not Available | Positive | 1649642 - 1649718 | Not Available |
| aminopeptidase | SAMEA3753290_01581 | Not Available | Positive | 1650046 - 1650831 | 29591.2 |
| uncharacterised protein | SAMEA3753290_01582 | Not Available | Negative | 1650968 - 1651447 | 18130.8 |
| inner membrane protein yafu | SAMEA3753290_01583 | Not Available | Negative | 1651457 - 1652371 | 34023.4 |
| hcp-like protein | SAMEA3753290_01584 | Not Available | Negative | 1652415 - 1652897 | 18000.5 |
| impa domain protein | SAMEA3753290_01585 | Not Available | Negative | 1652921 - 1654273 | 50765.5 |
| icmf-like protein | SAMEA3753290_01586 | Not Available | Negative | 1654284 - 1657808 | 134304.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





