Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | SAMEA3753290_01556 | Not Available | Positive | 1626558 - 1627289 | 28047.8 |
| putative inner membrane protein | SAMEA3753290_01557 | Not Available | Positive | 1627349 - 1627456 | 3642.85 |
| abc transporter permease | SAMEA3753290_01558 | Not Available | Negative | 1627437 - 1628168 | 25530.1 |
| abc transporter atp-binding protein | SAMEA3753290_01559 | Not Available | Negative | 1628173 - 1629099 | 34442.7 |
| abc transporter permease | SAMEA3753290_01560 | Not Available | Negative | 1629092 - 1630249 | 41134.2 |
| abc transporter substrate-binding protein | SAMEA3753290_01561 | Not Available | Negative | 1630256 - 1631173 | 32543.0 |
| periplasmic beta-glucosidase | SAMEA3753290_01562 | Not Available | Negative | 1631384 - 1633651 | 82481.4 |
| d-lactate dehydrogenase | SAMEA3753290_01563 | Not Available | Positive | 1633877 - 1635592 | 64680.0 |
| penicillin-binding protein 7 | SAMEA3753290_01564 | Not Available | Negative | 1635630 - 1636562 | 33861.3 |
| inner membrane protein | SAMEA3753290_01565 | Not Available | Negative | 1636736 - 1637323 | 21692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





