Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-binding rossmann-fold domain | SAMEA3753290_01408 | Not Available | Positive | 1465547 - 1466440 | 32686.7 |
| transposase | SAMEA3753290_01409 | Not Available | Negative | 1466488 - 1467378 | 34197.5 |
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3753290_01410 | Not Available | Negative | 1467575 - 1468348 | 28599.7 |
| histidine transport system permease hism | SAMEA3753290_01411 | Not Available | Negative | 1468356 - 1469072 | 26871.3 |
| histidine abc transporter permease | SAMEA3753290_01412 | Not Available | Negative | 1469069 - 1469755 | 24634.8 |
| histidine abc transporter, substrate-binding periplasmic protein | SAMEA3753290_01413 | Not Available | Negative | 1469845 - 1470627 | 28484.9 |
| lysine-arginine-ornithine-binding periplasmic protein | SAMEA3753290_01414 | Not Available | Negative | 1470848 - 1471630 | 27963.0 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3753290_01415 | Not Available | Negative | 1471896 - 1472465 | 20696.3 |
| amidophosphoribosyltransferase | SAMEA3753290_01416 | Not Available | Negative | 1472560 - 1474077 | 56491.3 |
| colicin v production protein | SAMEA3753290_01417 | Not Available | Negative | 1474114 - 1474602 | 17991.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





