Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfbu family protein | SAMEA3753290_01398 | Not Available | Negative | 1455939 - 1456433 | 19537.4 |
| inner membrane protein | SAMEA3753290_01399 | Not Available | Negative | 1456516 - 1456971 | 17214.1 |
| acetate/propionate kinase | SAMEA3753290_01400 | Not Available | Positive | 1457309 - 1458511 | 43293.0 |
| phosphate acetyltransferase | SAMEA3753290_01401 | Not Available | Positive | 1458586 - 1460730 | 77176.6 |
| putative c4-dicarboxylate anaerobic transporter | SAMEA3753290_01402 | Not Available | Positive | 1460962 - 1462440 | 53184.1 |
| nudix hydrolase | SAMEA3753290_01403 | Not Available | Negative | 1462473 - 1463015 | 20376.9 |
| putative phosphodiesterase | SAMEA3753290_01404 | Not Available | Negative | 1463073 - 1463624 | 19992.1 |
| putative glutathione s-transferase | SAMEA3753290_01405 | Not Available | Negative | 1463680 - 1464324 | 24298.9 |
| putative glutathione s-transferase | SAMEA3753290_01406 | Not Available | Positive | 1464460 - 1465107 | 24501.2 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3753290_01407 | Not Available | Positive | 1465164 - 1465526 | 14082.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





