Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein lolb | SAMEA3753290_01146 | Not Available | Positive | 1183572 - 1184195 | 23579.1 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMEA3753290_01147 | Not Available | Positive | 1184195 - 1185046 | 30956.2 |
| ribose-phosphate pyrophosphokinase | SAMEA3753290_01148 | Not Available | Positive | 1185131 - 1186144 | 36651.3 |
| sulfate transporter ychm | SAMEA3753290_01149 | Not Available | Positive | 1186296 - 1187948 | 58388.5 |
| putative membrane protein ychh | SAMEA3753290_01150 | Not Available | Negative | 1188003 - 1188281 | 10486.9 |
| peptidyl-trna hydrolase | SAMEA3753290_01151 | Not Available | Positive | 1188559 - 1189143 | 21025.5 |
| gtp-binding protein | SAMEA3753290_01152 | Not Available | Positive | 1189260 - 1190351 | 39683.6 |
| membrane protein | SAMEA3753290_01153 | Not Available | Negative | 1190647 - 1190850 | 8082.29 |
| outer membrane autotransporter | SAMEA3753290_01154 | Not Available | Positive | 1191195 - 1194080 | 100409.0 |
| pts-dependent dihydroxyacetone kinase operon regulator (sigma-54 dependent transcriptional regulator) | SAMEA3753290_01155 | Not Available | Negative | 1194180 - 1196099 | 70537.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





