Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycif protein | SAMEA3753290_01092 | Not Available | Positive | 1134870 - 1135370 | 18598.2 |
| protein ycie | SAMEA3753290_01093 | Not Available | Positive | 1135416 - 1135922 | 18985.6 |
| outer membrane protein w | SAMEA3753290_01094 | Not Available | Negative | 1135982 - 1136620 | 22929.1 |
| membrane protein ycic | SAMEA3753290_01095 | Not Available | Positive | 1136977 - 1137720 | 26434.6 |
| putative intracellular septation protein | SAMEA3753290_01096 | Not Available | Positive | 1137750 - 1138289 | 20821.3 |
| putative acyl-coa thioester hydrolase | SAMEA3753290_01097 | Not Available | Positive | 1138394 - 1138792 | 14231.4 |
| transport protein tonb | SAMEA3753290_01098 | Not Available | Negative | 1138832 - 1139566 | 26601.3 |
| putative cytoplasmic protein ycii | SAMEA3753290_01099 | Not Available | Positive | 1139679 - 1140071 | 14182.0 |
| voltage-gated potassium channel | SAMEA3753290_01100 | Not Available | Positive | 1140371 - 1141624 | 46080.2 |
| cardiolipin synthetase | SAMEA3753290_01101 | Not Available | Positive | 1141995 - 1143455 | 54856.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





