Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate-flavodoxin oxidoreductase | SAMEA3753290_00997 | Not Available | Positive | 1036270 - 1039794 | 128832.0 |
| outer membrane protein n (porin) | SAMEA3753290_00999 | Not Available | Positive | 1040161 - 1041294 | 41207.9 |
| putative universal stress protein | SAMEA3753290_01000 | Not Available | Positive | 1041435 - 1041869 | 15959.4 |
| c32 trna thiolase | SAMEA3753290_01001 | Not Available | Positive | 1042045 - 1042980 | 35402.8 |
| atp-independent rna helicase | SAMEA3753290_01002 | Not Available | Negative | 1043109 - 1044482 | 49214.7 |
| uncharacterised protein | SAMEA3753290_01003 | Not Available | Negative | 1044512 - 1044685 | 6427.87 |
| zinc transport protein | SAMEA3753290_01005 | Not Available | Negative | 1044960 - 1045943 | 36628.4 |
| putative signaling protein | SAMEA3753290_01006 | Not Available | Positive | 1046198 - 1047430 | 46495.9 |
| smr domain protein | SAMEA3753290_01007 | Not Available | Negative | 1047451 - 1048014 | 21563.8 |
| aminobenzoyl-glutamate utilization protein a | SAMEA3753290_01009 | Not Available | Positive | 1049428 - 1050738 | 46575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





