Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vgrg protein, encoded within repeats that are hotspots for chromosomal duplication formation | SAMEA3753290_00925 | Not Available | Negative | 958165 - 960273 | 78741.8 |
| uncharacterised protein | SAMEA3753290_00926 | Not Available | Negative | 961094 - 961306 | 8259.59 |
| putative glutathione s-transferase | SAMEA3753290_00927 | Not Available | Negative | 961382 - 961999 | 23381.1 |
| l-asparagine permease | SAMEA3753290_00928 | Not Available | Positive | 962266 - 963765 | 54236.3 |
| putative receptor | SAMEA3753290_00929 | Not Available | Negative | 963880 - 964941 | 38658.2 |
| tonb-dependent receptor | SAMEA3753290_00930 | Not Available | Positive | 965183 - 967285 | 77250.9 |
| gntr family transcriptional regulator | SAMEA3753290_00931 | Not Available | Negative | 967321 - 967986 | 25153.0 |
| putative zinc-binding dehydrogenase | SAMEA3753290_00932 | Not Available | Negative | 968184 - 969221 | 37600.0 |
| acetyltransferase ynca | SAMEA3753290_00933 | Not Available | Positive | 969402 - 969920 | 19258.7 |
| inner membrane protein | SAMEA3753290_00934 | Not Available | Positive | 969917 - 970366 | 15856.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





