Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | SAMEA3753290_00799 | Not Available | Positive | 815379 - 817190 | 64614.8 |
| khg/kdpg aldolase | SAMEA3753290_00800 | Not Available | Positive | 817227 - 817868 | 22285.3 |
| phosphoribosylglycinamide formyltransferase 2 | SAMEA3753290_00801 | Not Available | Negative | 817924 - 819102 | 42392.2 |
| dna damage-inducible protein yebg | SAMEA3753290_00802 | Not Available | Positive | 819236 - 819526 | 10717.5 |
| putative lipoprotein | SAMEA3753290_00803 | Not Available | Positive | 819593 - 819949 | 12904.3 |
| uncharacterised protein | SAMEA3753290_00804 | Not Available | Negative | 819863 - 820069 | 7287.61 |
| uncharacterised protein | SAMEA3753290_00805 | Not Available | Negative | 820106 - 820216 | 4099.04 |
| inner membrane protein | SAMEA3753290_00806 | Not Available | Positive | 820276 - 820935 | 23776.2 |
| protease ii | SAMEA3753290_00807 | Not Available | Positive | 821144 - 823204 | 79450.6 |
| exodeoxyribonuclease x | SAMEA3753290_00808 | Not Available | Negative | 823201 - 823863 | 25092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





