Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-cysteine desulfhydrase | SAMEA3753290_00708 | Not Available | Positive | 725167 - 726153 | 35224.5 |
| putative amino acid transport protein abc superfamily | SAMEA3753290_00709 | Not Available | Positive | 726168 - 726836 | 24802.7 |
| putative cystine abc-transporter, atp-binding protein | SAMEA3753290_00710 | Not Available | Positive | 726833 - 727585 | 27677.7 |
| dna-binding transcriptional activator sdia | SAMEA3753290_00711 | Not Available | Positive | 727815 - 728537 | 28017.7 |
| conserved protein, duf2594 family | SAMEA3753290_00712 | Not Available | Negative | 728605 - 728829 | 8239.04 |
| response regulator uvry | SAMEA3753290_00713 | Not Available | Positive | 729288 - 729944 | 23894.1 |
| uvrabc system protein c | SAMEA3753290_00714 | Not Available | Positive | 729941 - 731773 | 68192.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMEA3753290_00715 | Not Available | Positive | 731830 - 732378 | 20701.7 |
| Trna-gly | Not Available | Not Available | Positive | 732530 - 732605 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 732660 - 732733 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





