Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3753290_00698 | Not Available | Negative | 714821 - 716026 | 44461.5 |
| putative lipoprotein | SAMEA3753290_00699 | Not Available | Positive | 716213 - 716626 | 15002.1 |
| alpha-amylase | SAMEA3753290_00700 | Not Available | Negative | 716660 - 718147 | 56617.2 |
| flagellar protein flit | SAMEA3753290_00701 | Not Available | Negative | 718225 - 718590 | 13843.7 |
| flagellar protein flis | SAMEA3753290_00702 | Not Available | Negative | 718590 - 719000 | 15020.1 |
| flagellar capping protein | SAMEA3753290_00703 | Not Available | Negative | 719025 - 720431 | 48500.1 |
| flagellin | SAMEA3753290_00704 | Not Available | Positive | 720697 - 722538 | 62525.4 |
| rna polymerase sigma factor for flagellar operon | SAMEA3753290_00705 | Not Available | Positive | 722858 - 723577 | 27552.8 |
| fliz protein | SAMEA3753290_00706 | Not Available | Positive | 723623 - 724174 | 21572.0 |
| cystine transporter subunit | SAMEA3753290_00707 | Not Available | Positive | 724205 - 725062 | 31040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





