Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trat | SAMEA3753290_00635 | Not Available | Negative | 660971 - 661099 | 4458.75 |
| 50s ribosomal protein l31 | SAMEA3753290_00636 | Not Available | Positive | 661523 - 661786 | 9916.74 |
| putative membraneprotein | SAMEA3753290_00638 | Not Available | Negative | 663099 - 663770 | 26323.3 |
| issfl3 orfc | SAMEA3753290_00640 | Not Available | Negative | 665153 - 665638 | 18605.6 |
| putative transposase | SAMEA3753290_00641 | Not Available | Positive | 665958 - 666383 | 15853.1 |
| transposase | SAMEA3753290_00642 | Not Available | Positive | 666380 - 666730 | 13200.2 |
| transposase | SAMEA3753290_00643 | Not Available | Positive | 666761 - 668374 | 61352.2 |
| issfl3 orfc | SAMEA3753290_00644 | Not Available | Negative | 668378 - 669235 | 31824.6 |
| is66 orf2 family protein | SAMEA3753290_00645 | Not Available | Negative | 669278 - 669658 | 14943.7 |
| uncharacterised protein | SAMEA3753290_00646 | Not Available | Negative | 669645 - 669974 | 12292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





