Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence protein | SAMEA3753290_00604 | Not Available | Negative | 630031 - 631023 | 38277.7 |
| macrolide-specific efflux protein | SAMEA3753290_00605 | Not Available | Positive | 631138 - 632253 | 40670.4 |
| macrolide export atp-binding/permease protein | SAMEA3753290_00606 | Not Available | Positive | 632250 - 634196 | 70690.8 |
| stationary phase/starvation inducible regulatory protein cspd | SAMEA3753290_00607 | Not Available | Negative | 634269 - 634493 | 7969.41 |
| atp-dependent clp protease adaptor protein | SAMEA3753290_00608 | Not Available | Positive | 634816 - 635136 | 12179.7 |
| atp-dependent clp protease atp-binding subunit | SAMEA3753290_00609 | Not Available | Positive | 635167 - 637443 | 84211.9 |
| integrase | SAMEA3753290_00611 | Not Available | Positive | 637961 - 639163 | 45376.7 |
| membrane protein | SAMEA3753290_00612 | Not Available | Negative | 639350 - 641167 | 70846.4 |
| uncharacterised protein | SAMEA3753290_00613 | Not Available | Negative | 642401 - 642586 | 6491.88 |
| putative prophage protein | SAMEA3753290_00614 | Not Available | Positive | 643218 - 644651 | 54263.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





