Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subunit of palmitoyl transferase for lipid a | SAMEA3752553_00072 | Not Available | Negative | 71538 - 72098 | 21770.6 |
| c4-dicarboxylate transporter dcuc | SAMEA3752553_00073 | Not Available | Positive | 72686 - 74071 | 48415.3 |
| two-component response regulator | SAMEA3752553_00074 | Not Available | Negative | 74112 - 74792 | 25454.9 |
| sensor kinase dpib | SAMEA3752553_00075 | Not Available | Negative | 74761 - 76419 | 61659.7 |
| citrate lyase synthetase | SAMEA3752553_00076 | Not Available | Positive | 76799 - 77857 | 40079.5 |
| citrate lyase acyl carrier protein (citrate lyase gamma chain) | SAMEA3752553_00077 | Not Available | Positive | 77872 - 78168 | 10689.9 |
| citrate lyase subunit beta | SAMEA3752553_00078 | Not Available | Positive | 78165 - 79073 | 33139.7 |
| citrate lyase subunit alpha | SAMEA3752553_00079 | Not Available | Positive | 79084 - 80616 | 55194.0 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | SAMEA3752553_00080 | Not Available | Positive | 80620 - 81171 | 20271.5 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | SAMEA3752553_00081 | Not Available | Positive | 81146 - 82024 | 31646.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





