Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate transport system permease | SAMEA3752553_00041 | Not Available | Positive | 41985 - 42725 | 27456.2 |
| glutamate/aspartate abc transporter, permease protein | SAMEA3752553_00042 | Not Available | Positive | 42725 - 43399 | 24916.2 |
| glutamate/aspartate abc transporter atp-binding protein | SAMEA3752553_00043 | Not Available | Positive | 43399 - 44124 | 26662.7 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3752553_00044 | Not Available | Positive | 44242 - 45177 | 33808.9 |
| chaperone protein | SAMEA3752553_00045 | Not Available | Positive | 45261 - 46931 | 61923.7 |
| hsc56 co-chaperone of hscc | SAMEA3752553_00046 | Not Available | Negative | 46991 - 48442 | 55686.1 |
| putative trna ligase | SAMEA3752553_00047 | Not Available | Negative | 48439 - 49146 | 27005.8 |
| outer membrane protein | SAMEA3752553_00048 | Not Available | Positive | 49247 - 49801 | 20865.9 |
| dnaj-class chaperone | SAMEA3752553_00049 | Not Available | Negative | 49811 - 51238 | 55220.3 |
| protein | SAMEA3752553_00050 | Not Available | Negative | 51235 - 51942 | 27793.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





