Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence damage-inducible protein a | SAMEA3752553_00521 | Not Available | Positive | 564787 - 565305 | 18211.7 |
| dipeptidyl carboxypeptidase ii | SAMEA3752553_00522 | Not Available | Negative | 565350 - 567395 | 77518.8 |
| starvation sensing protein rspa | SAMEA3752553_00604 | Not Available | Negative | 630741 - 631955 | 45998.1 |
| inner membrane protein | SAMEA3752553_00605 | Not Available | Negative | 632161 - 632487 | 11920.2 |
| protein | SAMEA3752553_00606 | Not Available | Positive | 632622 - 632963 | 12943.4 |
| spermidine n1-acetyltransferase | SAMEA3752553_00607 | Not Available | Positive | 632998 - 633558 | 21888.2 |
| lipoprotein | SAMEA3752553_00608 | Not Available | Negative | 633561 - 634307 | 27876.9 |
| protein | SAMEA3752553_00609 | Not Available | Positive | 634379 - 634684 | 10491.3 |
| putative dimethyl sulfoxide reductase, oxidoreductase subunit | SAMEA3752553_00610 | Not Available | Positive | 634883 - 637309 | 89620.7 |
| putative dimethyl sulfoxide reductase, olydopterin dinucleotide binding subunit | SAMEA3752553_00611 | Not Available | Positive | 637397 - 639793 | 88952.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





