Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3752553_00452 | Not Available | Positive | 481574 - 482464 | 32624.8 |
| abc transporter atp-binding protein | SAMEA3752553_00453 | Not Available | Negative | 482501 - 483427 | 34642.1 |
| d-ala-d-ala transporter subunit ddpd | SAMEA3752553_00454 | Not Available | Negative | 483420 - 484406 | 36015.0 |
| abc transporter permease | SAMEA3752553_00455 | Not Available | Negative | 484403 - 485299 | 31915.8 |
| abc transporter permease | SAMEA3752553_00456 | Not Available | Negative | 485296 - 486318 | 37393.4 |
| abc transporter substrate-binding protein | SAMEA3752553_00457 | Not Available | Negative | 486320 - 487870 | 57648.1 |
| d-alanyl-d-alanine dipeptidase | SAMEA3752553_00458 | Not Available | Negative | 487884 - 488465 | 21228.2 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | SAMEA3752553_00459 | Not Available | Negative | 488723 - 491122 | 90268.6 |
| putative signal transduction protein | SAMEA3752553_00460 | Not Available | Negative | 491147 - 492529 | 53210.8 |
| putative lipoprotein | SAMEA3752553_00461 | Not Available | Negative | 492901 - 494220 | 49533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





