Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | SAMEA3752553_00442 | Not Available | Negative | 472600 - 474297 | 63167.0 |
| 30s ribosomal subunit s22 | SAMEA3752553_00443 | Not Available | Negative | 474454 - 474591 | 5096.13 |
| biofilm-dependent modulation protein | SAMEA3752553_00444 | Not Available | Negative | 474693 - 474908 | 7988.24 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3752553_00445 | Not Available | Positive | 475253 - 475684 | 15089.0 |
| 3-hydroxybutyrate dehydrogenase | SAMEA3752553_00446 | Not Available | Negative | 475719 - 476489 | 27217.6 |
| citrate transporter family protein | SAMEA3752553_00447 | Not Available | Negative | 476501 - 477892 | 48454.4 |
| 3-hydroxyacyl-coa dehydrogenase | SAMEA3752553_00448 | Not Available | Negative | 477938 - 478861 | 34185.5 |
| acetyl-coa acetyltransferase | SAMEA3752553_00449 | Not Available | Negative | 478851 - 480056 | 41752.0 |
| 3-oxoacid coa-transferase subunit b | SAMEA3752553_00450 | Not Available | Negative | 480066 - 480722 | 23110.4 |
| 3-oxoadipate coa-transferase subunit a | SAMEA3752553_00451 | Not Available | Negative | 480725 - 481432 | 25297.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





