Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3752553_00390 | Not Available | Negative | 413236 - 414180 | 36838.7 |
| multidrug resistance protein | SAMEA3752553_00391 | Not Available | Positive | 414647 - 415879 | 44616.1 |
| inner membrane protein | SAMEA3752553_00392 | Not Available | Positive | 415920 - 417200 | 48255.6 |
| 2-hydroxyglutaryl-coa dehydratase | SAMEA3752553_00393 | Not Available | Positive | 417316 - 418467 | 42758.3 |
| atpase, activator of (r)-hydroxyglutaryl-coa dehydratase | SAMEA3752553_00394 | Not Available | Positive | 418477 - 419244 | 27188.7 |
| protein of uncharacterised function (duf3343) | SAMEA3752553_00395 | Not Available | Positive | 419241 - 419498 | 9655.84 |
| sdia-regulated domain protein | SAMEA3752553_00396 | Not Available | Positive | 419452 - 420423 | 35941.2 |
| major facilitator superfamily protein | SAMEA3752553_00397 | Not Available | Positive | 420491 - 421669 | 41289.1 |
| rna 2'-phosphotransferase-like protein | SAMEA3752553_00398 | Not Available | Negative | 421682 - 422236 | 20458.6 |
| putative transporter | SAMEA3752553_00399 | Not Available | Positive | 422486 - 423169 | 23794.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





