Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 4-hydroxyphenylacetate permease hpax | SAMEA3752553_00380 | Not Available | Positive | 399889 - 401265 | 50555.6 |
| regulator of the 4hpa-hydroxylase operon | SAMEA3752553_00381 | Not Available | Positive | 401275 - 402165 | 34355.1 |
| 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | SAMEA3752553_00382 | Not Available | Positive | 402416 - 403978 | 58868.0 |
| 4-hydroxyphenylacetate 3-monooxygenase, reductase component | SAMEA3752553_00383 | Not Available | Positive | 403996 - 404508 | 18550.7 |
| putative carbon starvation protein | SAMEA3752553_00384 | Not Available | Positive | 404901 - 407051 | 77357.5 |
| yjix protein | SAMEA3752553_00385 | Not Available | Positive | 407101 - 407304 | 7729.24 |
| gtp-binding protein yjia | SAMEA3752553_00386 | Not Available | Positive | 407315 - 408271 | 35625.7 |
| penicillin g acylase | SAMEA3752553_00387 | Not Available | Negative | 408349 - 410889 | 94647.5 |
| protein yjis | SAMEA3752553_00388 | Not Available | Negative | 411241 - 411405 | 6847.35 |
| fused dna-binding transcriptional regulator | SAMEA3752553_00389 | Not Available | Positive | 411582 - 412994 | 53094.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





