Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | SAMEA3752553_05196 | Not Available | Negative | 5262184 - 5263653 | 54071.2 |
| l-rhamnose operon regulatory protein | SAMEA3752553_05197 | Not Available | Positive | 5263941 - 5264777 | 32317.2 |
| transcriptional activator rhar | SAMEA3752553_05198 | Not Available | Positive | 5264761 - 5265699 | 35638.4 |
| l rhamnose-proton symporter | SAMEA3752553_05199 | Not Available | Negative | 5265696 - 5266730 | 37288.1 |
| atp-dependent rna helicase rhle | SAMEA3752553_05200 | Not Available | Negative | 5267403 - 5268767 | 50022.4 |
| tetr family transcriptional regulator | SAMEA3752553_05201 | Not Available | Positive | 5268996 - 5269667 | 25018.1 |
| hlyd-family secretion protein | SAMEA3752553_05202 | Not Available | Positive | 5269670 - 5270665 | 36286.7 |
| abc transporter | SAMEA3752553_05203 | Not Available | Positive | 5270658 - 5272394 | 63163.3 |
| abc transporter permease | SAMEA3752553_05204 | Not Available | Positive | 5272387 - 5273520 | 42062.4 |
| abc transporter permease | SAMEA3752553_05205 | Not Available | Positive | 5273531 - 5274637 | 41568.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





