Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | SAMEA3752553_04950 | Not Available | Negative | 5031853 - 5032935 | 40262.1 |
| type vi secretion system protein impg | SAMEA3752553_04951 | Not Available | Negative | 5032899 - 5034749 | 71190.0 |
| type vi secretion system lysozyme-like protein | SAMEA3752553_04952 | Not Available | Negative | 5034753 - 5035166 | 15520.1 |
| type vi secretion protein evpb | SAMEA3752553_04953 | Not Available | Negative | 5035173 - 5036648 | 55705.0 |
| uncharacterised protein | SAMEA3752553_04954 | Not Available | Negative | 5036699 - 5036923 | 8411.01 |
| type vi secretion protein | SAMEA3752553_04955 | Not Available | Negative | 5036958 - 5037458 | 18047.5 |
| putative type vi secretion system protein | SAMEA3752553_04956 | Not Available | Positive | 5038156 - 5038674 | 19256.8 |
| impa family type vi secretion-associated protein | SAMEA3752553_04957 | Not Available | Positive | 5038884 - 5041025 | 79757.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3752553_04958 | Not Available | Positive | 5041585 - 5042280 | 23741.1 |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3752553_04959 | Not Available | Positive | 5042342 - 5043277 | 34507.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





