Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | SAMEA3752553_04929 | Not Available | Positive | 5008806 - 5009585 | 29128.3 |
| putative methyltransferase | SAMEA3752553_04930 | Not Available | Positive | 5009663 - 5010433 | 28378.6 |
| membrane-bound lytic murein transglycosylase d | SAMEA3752553_04931 | Not Available | Negative | 5010481 - 5011701 | 44680.6 |
| hydroxyacylglutathione hydrolase | SAMEA3752553_04932 | Not Available | Negative | 5011911 - 5012666 | 28421.8 |
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3752553_04933 | Not Available | Positive | 5012700 - 5013422 | 27295.7 |
| ribonuclease h | SAMEA3752553_04934 | Not Available | Negative | 5013419 - 5013886 | 17597.9 |
| dna polymerase iii subunit epsilon | SAMEA3752553_04935 | Not Available | Positive | 5013942 - 5014682 | 27404.9 |
| Trna-asp | Not Available | Not Available | Positive | 5014815 - 5014891 | Not Available |
| aminopeptidase | SAMEA3752553_04937 | Not Available | Positive | 5015218 - 5016003 | 29591.2 |
| uncharacterised protein | SAMEA3752553_04938 | Not Available | Negative | 5016140 - 5016619 | 18146.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





