Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1330351 bp
Thymine Count
1331131 bp
Guanine Count
1348395 bp
Cytosine Count
1373263 bp
Genome Length
5383453 bp
Protein-coding Genes
4777 genes
Non-Coding Genes
397 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3752553_04866 | Not Available | Positive | 4953024 - 4953734 | 26940.3 |
| putative sugar isomerase | SAMEA3752553_04867 | Not Available | Positive | 4953742 - 4954722 | 36974.9 |
| major facilitator superfamily protein | SAMEA3752553_04868 | Not Available | Positive | 4954824 - 4956089 | 46382.0 |
| transcriptional regulator yihw | SAMEA3752553_04869 | Not Available | Negative | 4956200 - 4956988 | 28754.5 |
| sugar kinase yihv | SAMEA3752553_04870 | Not Available | Negative | 4957028 - 4957924 | 31682.6 |
| oxidoreductase with nad(p)-binding rossmann-fold domain, 3-hydroxyisobutyrate dehydrogenase | SAMEA3752553_04871 | Not Available | Positive | 4958097 - 4958975 | 30434.1 |
| aldolase yiht | SAMEA3752553_04872 | Not Available | Positive | 4959000 - 4959887 | 31713.5 |
| dehydrogenase | SAMEA3752553_04873 | Not Available | Positive | 4959920 - 4960930 | 35967.7 |
| transporter | SAMEA3752553_04874 | Not Available | Positive | 4961000 - 4962433 | 50772.8 |
| transmembrane transport protein | SAMEA3752553_04875 | Not Available | Positive | 4962532 - 4963881 | 49167.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





